LociPartitionerArgs

Value Members

1. final def !=(arg0: AnyRef): Boolean

   Definition Classes

   AnyRef

2. final def !=(arg0: Any): Boolean

   Definition Classes

   Any

3. final def ##(): Int

   Definition Classes

   AnyRef → Any

4. final def ==(arg0: AnyRef): Boolean

   Definition Classes

   AnyRef

5. final def ==(arg0: Any): Boolean

   Definition Classes

   Any

6. var _lociPartitioningPathOpt: Option[String]

   Attributes

   protected

7. final def asInstanceOf[T0]: T0

   Definition Classes

   Any

8. def clone(): AnyRef

   Attributes

   protected[java.lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( ... )

9. final def eq(arg0: AnyRef): Boolean

   Definition Classes

   AnyRef

10. def equals(arg0: Any): Boolean

    Definition Classes

    AnyRef → Any

11. var explodeCoverage: Boolean

    Definition Classes

    CappedRegionsPartitionerArgs

12. def finalize(): Unit

    Attributes

    protected[java.lang]

    Definition Classes

    AnyRef

    Annotations

    @throws( classOf[java.lang.Throwable] )

13. final def getClass(): Class[_]

    Definition Classes

    AnyRef → Any

14. def halfWindowSize: Int

    Definition Classes

    HalfWindowConfig

15. def hashCode(): Int

    Definition Classes

    AnyRef → Any

16. final def isInstanceOf[T0]: Boolean

    Definition Classes

    Any

17. var lociPartitionerName: String

    Attributes

    protected

18. def lociPartitioningPathOpt: Option[String]

    Simple getter interface here supports overriding behavior here to support different resolution logic, cf.

    Simple getter interface here supports overriding behavior here to support different resolution logic, cf. PartitionedRegionsArgs.

19. var maxReadsPerPartition: Int

    Definition Classes

    CappedRegionsPartitionerArgs

20. final def ne(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

21. final def notify(): Unit

    Definition Classes

    AnyRef

22. final def notifyAll(): Unit

    Definition Classes

    AnyRef

23. def numPartitions(sc: SparkContext): Int

    Definition Classes

    UniformPartitionerArgs

24. var parallelism: NumPartitions

    Attributes

    protected

    Definition Classes

    UniformPartitionerArgs

25. var partitioningAccuracy: NumMicroPartitions

    Long >= 1.

    Long >= 1. Number of micro-partitions generated for each of the numPartitions Spark partitions that will be computed. Higher values of this will result in a more exact but more expensive computation. In the extreme, setting this to greater than the number of loci (per partition) will result in an exact calculation.

    Definition Classes

    MicroRegionPartitionerArgs

26. var printPartitioningStats: Boolean

27. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes

    AnyRef

28. def toString(): String

    Definition Classes

    AnyRef → Any

29. var trimRanges: Boolean

    Definition Classes

    CappedRegionsPartitionerArgs

30. final def wait(): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

31. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

32. final def wait(arg0: Long): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )