Module Biokepi.EDSL.Compile.To_workflow (.ml)

module To_workflow: Biokepi_pipeline_edsl.To_workflow

Compiler to Ketrew workflows using the Biokepi.Tools implementations.

The compiler is itself a functor, see the example:

          let module Workflow_compiler =

            Biokepi.EDSL.Compile.To_workflow.Make(struct

              let processors = 42

              let work_dir = "/work/dir/"

              let machine =

                Biokepi.Setup.Build_machine.create

                  "ssh://example.com/tmp/KT/"

            end)

          in

          let module Ketrew_pipeline_1 = Pipeline_1(Workflow_compiler) in

        

val (//) : string -> string -> string

module File_type_specification: sig .. end

module type Compiler_configuration = sig .. end

module Defaults: sig .. end

module Make: 
functor (Config : Compiler_configuration) -> sig .. end