org.hammerlab.guacamole.filters

somatic

package somatic

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Value Members

  1. object SomaticAlternateReadDepthFilter

  2. object SomaticAverageBaseQualityFilter

  3. object SomaticAverageMappingQualityFilter

  4. object SomaticGenotypeFilter

  5. object SomaticLogOddsFilter

  6. object SomaticMedianMismatchFilter

  7. object SomaticMinimumLikelihoodFilter

    Filter to remove genotypes where the somatic likelihood is low

  8. object SomaticReadDepthFilter

    Filter to remove genotypes where the number of reads at the locus is too low or too high

  9. object SomaticVAFFilter

Ungrouped