org.hammerlab.guacamole.jointcaller

pileup_summarization

package pileup_summarization

Visibility
  1. Public
  2. All

Type Members

  1. case class MultiplePileupStats(inputs: InputCollection, singleSampleStats: PerSample[PileupStats]) extends Product with Serializable

    Collection of per-sample PileupStats instances plus pooled normal and tumor DNA PileupStats.

  2. class PileupStats extends AnyRef

    Statistics over a PileupElement instances (a pileup).

  3. case class ReadSubsequence(read: MappedRead, startLocus: Locus, endLocus: Locus, startReadPosition: Int, endReadPosition: Int) extends Product with Serializable

    A sub-sequence of the bases sequenced by a MappedRead.

Value Members

  1. object PileupStats

  2. object ReadSubsequence extends Serializable

Ungrouped