org.hammerlab.guacamole.loci.parsing

ParsedLociRange

object ParsedLociRange

Linear Supertypes
AnyRef, Any
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. ParsedLociRange
  2. AnyRef
  3. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any
  3. final def ##(): Int

    Definition Classes
    AnyRef → Any
  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any
  6. def apply(lociRangeStr: String): Option[ParsedLociRange]

    Parse a (string) loci expression and add it to the builder.

    Parse a (string) loci expression and add it to the builder. Example expressions:

    "all": all sites on all contigs. "none": no loci, used as a default in some places. "chr1,chr3": all sites on contigs chr1 and chr3. "chr1:10000-20000,chr2": sites x where 10000 <= x < 20000 on chr1, all sites on chr2. "chr1:10000": just chr1, position 10000; equivalent to "chr1:10000-10001". "chr1:10000-": chr1, from position 10000 to the end of chr1.

  7. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  8. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  9. val contigAndLoci: Regex

  10. val contigOnly: Regex

  11. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  12. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  13. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  14. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  15. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  16. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  17. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  18. final def notify(): Unit

    Definition Classes
    AnyRef
  19. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  20. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  21. def toString(): String

    Definition Classes
    AnyRef → Any
  22. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  23. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  24. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from AnyRef

Inherited from Any

Ungrouped