ReadSets

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1. final def !=(arg0: AnyRef): Boolean

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3. final def ##(): Int

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5. final def ==(arg0: Any): Boolean

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6. def apply(readsRDDs: PerSample[ReadsRDD], sequenceDictionary: SequenceDictionary): ReadSets

7. def apply(sc: SparkContext, inputsAndFilters: PerSample[(Input, InputFilters)], contigLengthsFromDictionary: Boolean): ReadSets

   Load reads from multiple files, allowing different filters to be applied to each file.

8. def apply(sc: SparkContext, inputs: PerSample[Input], filters: InputFilters, contigLengthsFromDictionary: Boolean = true): ReadSets

   Load reads from multiple files, merging their sequence dictionaries and verifying that they are consistent.

9. def apply(sc: SparkContext, args: Base): (ReadSets, LociSet)

10. final def asInstanceOf[T0]: T0

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39. final def wait(arg0: Long, arg1: Int): Unit

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