Base
args
Bases
util
BasesOrdering
Bases
base
Match
MatchOrMisMatch
Mismatch
baseQualities
ReadSubsequence
Insertion
MappedRead
PairedRead
Read
UnmappedRead
baseQuality
Deletion
Match
MatchOrMisMatch
Mismatch
baseQualityStringToArray
Read
baseToString
Bases
basename
ReadsRDD
basesToString
Bases
bdgVariant
ReferenceVariant
bdgVariantDatabase
ReferenceVariant
bestAllele
MultiSampleMultiAlleleEvidence
bins
Arguments
breeze
root
broadcastedContigs
ReferenceBroadcast
buildMdTag
ReferenceGenome
buildMixtureModel
VAFHistogram
buildVariantsFromPath
AssemblyUtils
byKey
ContigsIterator