FishersExactTest
filters
ForceCallLociArgs
args
failedVendorQualityChecks
MappedRead
PairedRead
Read
UnmappedRead
failingFilterNames
MultiSampleSingleAlleleEvidence
failsFilters
MultiSampleSingleAlleleEvidence
filterSomaticNormalDepth
Parameters
CommandlineArguments
filterSomaticNormalNonreferencePercent
Parameters
CommandlineArguments
filterStrandBiasPhred
Parameters
CommandlineArguments
filters
guacamole
findPotentialVariantAtLocus
Caller
forceCallLociFile
ForceCallLociArgs
forceCallLociFileOpt
ForceCallLociArgs
forceCallLociStr
ForceCallLociArgs
forceCallLociStrOpt
ForceCallLociArgs
forwardDepth
AlleleEvidence
fromArgs
ParsedLoci
fromVCF
ParsedLoci