org.hammerlab.guacamole.filters.somatic.SomaticGenotypeFilter

SomaticGenotypeFilterArguments

trait SomaticGenotypeFilterArguments extends AnyRef

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  1. final def !=(arg0: AnyRef): Boolean

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  2. final def !=(arg0: Any): Boolean

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  3. final def ##(): Int

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  4. final def ==(arg0: AnyRef): Boolean

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  5. final def ==(arg0: Any): Boolean

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  6. final def asInstanceOf[T0]: T0

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  7. def clone(): AnyRef

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  8. var debugGenotypeFilters: Boolean

  9. final def eq(arg0: AnyRef): Boolean

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  10. def equals(arg0: Any): Boolean

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  11. def finalize(): Unit

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  12. final def getClass(): Class[_]

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  13. def hashCode(): Int

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  14. final def isInstanceOf[T0]: Boolean

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  15. var maxTumorReadDepth: Int

  16. var maximumMedianMismatches: Int

  17. var minAverageBaseQuality: Int

  18. var minAverageMappingQuality: Int

  19. var minLOD: Int

  20. var minLikelihood: Int

  21. var minNormalReadDepth: Int

  22. var minTumorAlternateReadDepth: Int

  23. var minTumorReadDepth: Int

  24. var minVAF: Int

  25. final def ne(arg0: AnyRef): Boolean

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  26. final def notify(): Unit

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  27. final def notifyAll(): Unit

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  28. final def synchronized[T0](arg0: ⇒ T0): T0

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  29. def toString(): String

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  30. final def wait(): Unit

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  31. final def wait(arg0: Long, arg1: Int): Unit

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  32. final def wait(arg0: Long): Unit

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