We're a lab within the Hollings Cancer Center at MUSC in Charleston, SC.

Home Blog Work Team Jobs Contact Blog Archive

© 2019. All rights reserved.

Blog Archive

December 2017

  • Introducing spark-bam

August 2017

  • Benchmarking MHCflurry, take 2

June 2017

  • Introducing SurvivalStan

May 2017

  • Kubeface: distributed computing in Python on Google Container Engine
  • Benchmarking MHCflurry

April 2017

  • Building Scala Projects: Maven vs. SBT

November 2016

  • Introducing Cohorts
  • Graph visualizations of MHC alleles

February 2016

  • Extending Gene Set Enrichment Analysis with Cancer Immunology Collections

December 2015

  • Our Experiences with Flow

November 2015

  • Ketrew Industries Two Hundred

October 2015

  • SVG→Canvas, the pileup.js Journey

September 2015

  • Testing Oml

August 2015

  • Introducing Oml, a Small OCaml Library for Numerical Computing

July 2015

  • Spree: A Live-Updating Web UI for Spark
  • Bundling and Distributing Complex ES6 Libraries in an ES5 World

June 2015

  • Complete Visual Testing and Continuous Integration with Seltest
  • Introducing pileup.js, a Browser-based Genome Viewer
  • Bioinformatics Workflows on a Hadoop Cluster

March 2015

  • Creating OCaml Code Coverage Reports for Ketrew

February 2015

  • Monitoring Spark with Graphite and Grafana
  • Testing React Web Apps with Mocha (Part 2)
  • Testing React Web Apps with Mocha
  • Methods and Coming Advances in Guacamole
  • Exploring the Genome with Ensembl and Python

January 2015

  • Introducing Guacamole 0.0.0
  • Introducing CycleDash 0.0.0
  • Faster Pileup Loading with BAI Indices
  • Introducing Ketrew 0.0.0

December 2014

  • Streaming from HDFS with igv-httpfs